PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.Y1TMX
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 124aa    MW: 14628.5 Da    PI: 11.1969
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.Y1TMXgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.95.6e-064972831
                 HHHHHHHHHHHHHHHHHCTSCCC. CS
          HLH  8 rErrRRdriNsafeeLrellPkas 31
                 +E+rRR+riN+++  L+ l+ ++ 
  Aradu.Y1TMX 49 VEQRRRRRINEKMKALQHLILNSI 72
                 8*******************9964 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.104.4E-64878IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
LAEDVPTNLV PSKRSSKRSR AVEVHNLSKK WLLWYLVSIS FKLMVVFLVE QRRRRRINEK  60
MKALQHLILN SIRSAKMKLA NFCIYKLELE QKRLKEDAFL KLSPAYQKML KVGACWTRQN  120
LVNG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016201722.18e-23PREDICTED: transcription factor SPATULA isoform X2
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2348723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.11e-08phytochrome interacting factor 3-like 5